Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4150Gluconolactonase protein family. (310 aa)    
Predicted Functional Partners:
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
  
  
 0.837
CSIRO_0812
Acetoin(diacetyl) reductase.
     
  0.676
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
     
 0.638
CSIRO_3963
Hypothetical protein.
 
     0.628
CSIRO_2660
Hypothetical protein.
  
    0.559
CSIRO_0626
Putative oxidoreductase.
  
  
  0.517
CSIRO_1340
Dpoxide hydrolase.
 
    0.508
CSIRO_3961
Short-chain specific acyl-CoA dehydrogenase.
  
     0.508
CSIRO_3833
Oxidoreductase-like protein.
  
 
 0.503
wbpB
Lipopolysaccaride biosynthesis protein WbpB.
  
 
 0.503
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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