Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_4151Ornithine cyclodeaminase. (319 aa)    
Predicted Functional Partners:
CSIRO_1399
Proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.877
CSIRO_3889
Arginase; Belongs to the arginase family.
    
 0.846
CSIRO_4152
Putative URI domain-containing endonuclease.
       0.814
CSIRO_2662
NAD-dependent malic enzyme.
     
 0.786
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 
 0.763
CSIRO_3820
Threonine dehydratase.
 
  
 0.689
CSIRO_1259
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.637
CSIRO_3945
Serine--glyoxylate aminotransferase.
 
  
 0.606
CSIRO_3947
Fe-S protein.
    
  0.564
CSIRO_2255
YbiC-like oxidoreductase; Belongs to the LDH2/MDH2 oxidoreductase family.
     
 0.558
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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