Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CSIRO_2327 | CSIRO_2329 | CSIRO_2327 | CSIRO_2329 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase. | 0.999 |
| CSIRO_2327 | CSIRO_3432 | CSIRO_2327 | CSIRO_3432 | methylmalonyl-CoA mutase. | Indolepyruvate ferredoxin oxidoreductase. | 0.810 |
| CSIRO_2327 | frc | CSIRO_2327 | CSIRO_4175 | methylmalonyl-CoA mutase. | Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.709 |
| CSIRO_2327 | paaN | CSIRO_2327 | CSIRO_3109 | methylmalonyl-CoA mutase. | Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase. | 0.798 |
| CSIRO_2329 | CSIRO_2327 | CSIRO_2329 | CSIRO_2327 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase. | 0.999 |
| CSIRO_2329 | CSIRO_3432 | CSIRO_2329 | CSIRO_3432 | methylmalonyl-CoA mutase. | Indolepyruvate ferredoxin oxidoreductase. | 0.810 |
| CSIRO_2329 | frc | CSIRO_2329 | CSIRO_4175 | methylmalonyl-CoA mutase. | Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.709 |
| CSIRO_2329 | paaN | CSIRO_2329 | CSIRO_3109 | methylmalonyl-CoA mutase. | Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase. | 0.798 |
| CSIRO_3432 | CSIRO_2327 | CSIRO_3432 | CSIRO_2327 | Indolepyruvate ferredoxin oxidoreductase. | methylmalonyl-CoA mutase. | 0.810 |
| CSIRO_3432 | CSIRO_2329 | CSIRO_3432 | CSIRO_2329 | Indolepyruvate ferredoxin oxidoreductase. | methylmalonyl-CoA mutase. | 0.810 |
| CSIRO_3432 | CSIRO_4017 | CSIRO_3432 | CSIRO_4017 | Indolepyruvate ferredoxin oxidoreductase. | Acetolactate synthase large subunit. | 0.729 |
| CSIRO_3432 | CSIRO_4176 | CSIRO_3432 | CSIRO_4176 | Indolepyruvate ferredoxin oxidoreductase. | Putative oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family. | 0.729 |
| CSIRO_3432 | CSIRO_4178 | CSIRO_3432 | CSIRO_4178 | Indolepyruvate ferredoxin oxidoreductase. | acetyl-CoA synthetase (ADP-forming) alpha chain. | 0.803 |
| CSIRO_3432 | frc | CSIRO_3432 | CSIRO_4175 | Indolepyruvate ferredoxin oxidoreductase. | Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.466 |
| CSIRO_3432 | paaN | CSIRO_3432 | CSIRO_3109 | Indolepyruvate ferredoxin oxidoreductase. | Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase. | 0.814 |
| CSIRO_4017 | CSIRO_3432 | CSIRO_4017 | CSIRO_3432 | Acetolactate synthase large subunit. | Indolepyruvate ferredoxin oxidoreductase. | 0.729 |
| CSIRO_4017 | frc | CSIRO_4017 | CSIRO_4175 | Acetolactate synthase large subunit. | Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.565 |
| CSIRO_4017 | paaN | CSIRO_4017 | CSIRO_3109 | Acetolactate synthase large subunit. | Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase. | 0.723 |
| CSIRO_4169 | CSIRO_4176 | CSIRO_4169 | CSIRO_4176 | Putative oxalate:formate antiporter. | Putative oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family. | 0.660 |
| CSIRO_4169 | CSIRO_4177 | CSIRO_4169 | CSIRO_4177 | Putative oxalate:formate antiporter. | Transcriptional regulator; Associated with tricarboxylic transport. | 0.570 |
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