Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_4195DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (491 aa)    
Predicted Functional Partners:
CSIRO_4239
Resolvase.
 
     0.768
CSIRO_0757
Site-specific recombinase; DNA invertase Pin-like.
 
     0.762
CSIRO_4238
Putative bacteriophage-related protein.
 
     0.762
CSIRO_0756
Putative bacteriophage-related protein.
 
     0.745
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.691
CSIRO_0946
Cobyrinic acid a,c-diamide synthase.
  
 
 0.645
CSIRO_3387
ATPase.
  
 
 0.645
CSIRO_4198
Phage terminase, large subunit.
 
     0.624
gidB
rRNA small subunit methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.586
CSIRO_2989
Hypothetical protein.
    
 
 0.483
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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