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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4199Glycolate dehydrogenaseiron-sulfur subunit. (433 aa)    
Predicted Functional Partners:
CSIRO_4200
Glycolate dehydrogenaseFAD-binding subunit.
 
 
 0.966
glcD
Glycolate dehydrogenase.
 
 0.950
CSIRO_0471
Glycolate dehydrogenase.
 
 
 0.883
CSIRO_0472
Glycolate dehydrogenase.
 
 0.871
CSIRO_3740
Aerobic fumarate hydratase class 1; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.822
CSIRO_1927
Iron-sulfur cluster-binding protein.
    
 0.800
CSIRO_2662
NAD-dependent malic enzyme.
  
 
 0.783
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.734
CSIRO_0268
Glutamate synthase (NADPH) large chain.
    
 0.729
CSIRO_2922
Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.711
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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