Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4211ABC transporter periplasmic substrate-binding protein. (424 aa)    
Predicted Functional Partners:
malF-2
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
 0.958
CSIRO_4212
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.951
malG-2
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.946
CSIRO_2037
Maltose/maltodextrin ABC transporter, permease protein.
 
 0.938
CSIRO_2038
Maltose/maltodextrin ABC transporter, permease protein.
 
 0.917
malF
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
 0.883
ugpA
SN-glycerol-3-phosphate transport system permease protein UgpA.
 
 0.878
CSIRO_2091
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.876
CSIRO_2035
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.875
malK
Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 
 0.874
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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