Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CSIRO_4216long-chain-fatty-acid--CoA ligase. (609 aa)    
Predicted Functional Partners:
CSIRO_4218
High-affinity leucine-specific transport system, periplasmic binding protein.
 
    0.911
CSIRO_4217
High-affinity branched-chain amino acid transport ATP-binding protein.
 
    0.906
CSIRO_4221
Branched-chain amino acid transport ATP-binding protein.
 
    0.885
CSIRO_4219
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.830
CSIRO_4220
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.811
CSIRO_3728
TolA protein.
    
 0.763
CSIRO_0317
Hypothetical protein.
   
 0.719
CSIRO_3955
long-chain-fatty-acid--CoA ligase.
  
  
 
0.711
CSIRO_1305
acyl-CoA dehydrogenase.
   
  0.703
CSIRO_1409
acyl-CoA dehydrogenase-like protein.
   
  0.703
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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