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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4218High-affinity leucine-specific transport system, periplasmic binding protein. (392 aa)    
Predicted Functional Partners:
CSIRO_4219
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.962
CSIRO_4220
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.960
CSIRO_4217
High-affinity branched-chain amino acid transport ATP-binding protein.
 
 
  0.945
CSIRO_4221
Branched-chain amino acid transport ATP-binding protein.
 
 
  0.943
CSIRO_4216
long-chain-fatty-acid--CoA ligase.
 
    0.909
CSIRO_2005
ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.894
CSIRO_3932
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.718
CSIRO_3931
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.679
CSIRO_0063
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.674
CSIRO_2084
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.669
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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