Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4249Hypothetical protein. (372 aa)    
Predicted Functional Partners:
CSIRO_4250
RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 
 0.899
CSIRO_3510
Hypothetical protein.
  
     0.659
CSIRO_3386
Hypothetical protein.
  
     0.590
CSIRO_3412
Hypothetical protein.
  
     0.546
CSIRO_2721
Hypothetical protein.
 
     0.539
CSIRO_1494
Hypothetical protein.
  
     0.498
CSIRO_0195
RNA polymerase sigma-70 factor; ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 
 0.467
CSIRO_3675
Hypothetical protein.
  
     0.462
CSIRO_0210
Hypothetical protein.
  
     0.450
CSIRO_0162
Hypothetical protein.
  
     0.435
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.