STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4293ABC transporter substrate-binding protein. (441 aa)    
Predicted Functional Partners:
malG
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.944
malF
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
 0.904
ugpE
SN-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 0.759
malK
Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 
 0.730
CSIRO_2038
Maltose/maltodextrin ABC transporter, permease protein.
  
 0.720
CSIRO_3973
SN-glycerol-3-phosphate transport system permease; Overlaps another CDS with the same product name.
  
 0.720
malG-2
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
 0.720
ugpA
SN-glycerol-3-phosphate transport system permease protein UgpA.
  
 0.692
CSIRO_2037
Maltose/maltodextrin ABC transporter, permease protein.
  
 0.692
CSIRO_3974
SN-glycerol-3-phosphate transport system permease; Overlaps another CDS with the same product name.
  
 0.692
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.