STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIM83327.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (284 aa)    
Predicted Functional Partners:
SIM83365.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
   0.971
SIM83340.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.969
SIM83353.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.944
SIM44528.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.922
SIN36244.1
Multiple sugar transport system permease protein.
 
 0.918
SIN40058.1
Cellobiose transport system permease protein.
 
  0.909
SIM61627.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.905
SIN38743.1
Multiple sugar transport system permease protein.
 
  0.903
SIM59858.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.900
SIN10088.1
Multiple sugar transport system permease protein; Non-canonical start codon; manually curated.
 
 0.897
Your Current Organism:
Micromonospora cremea
NCBI taxonomy Id: 709881
Other names: CECT 7891, DSM 45599, M. cremea, Micromonospora cremea Carro et al. 2012, Micromonospora sp. CR30, Micromonospora sp. CR36, strain CR30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.