STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN08515.1Endonuclease, Uma2 family (restriction endonuclease fold). (183 aa)    
Predicted Functional Partners:
SIN08527.1
Protein of unknown function.
 
     0.680
SIN08541.1
Protein of unknown function.
       0.605
SIN32823.1
Protein of unknown function.
  
     0.576
SIN08503.1
Methyltransferase domain-containing protein.
       0.518
SIN32263.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Micromonospora cremea
NCBI taxonomy Id: 709881
Other names: CECT 7891, DSM 45599, M. cremea, Micromonospora cremea Carro et al. 2012, Micromonospora sp. CR30, Micromonospora sp. CR36, strain CR30
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