STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN20658.1tRNA threonylcarbamoyl adenosine modification protein YeaZ. (225 aa)    
Predicted Functional Partners:
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.998
SIN20701.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
 
 
 0.995
SIN20649.1
Ribosomal-protein-alanine N-acetyltransferase.
  
  
 0.927
SIN43702.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.739
SIN20626.1
Hypothetical protein.
       0.690
SIN33627.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
    0.605
SIN34012.1
uracil-DNA glycosylase, family 4.
 
    0.571
SIN39130.1
DNA polymerase.
  
    0.549
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.538
SIN09027.1
Glutamate synthase (NADH) large subunit.
       0.532
Your Current Organism:
Micromonospora cremea
NCBI taxonomy Id: 709881
Other names: CECT 7891, DSM 45599, M. cremea, Micromonospora cremea Carro et al. 2012, Micromonospora sp. CR30, Micromonospora sp. CR36, strain CR30
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