STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN23894.1Acetyltransferase (GNAT) family protein. (311 aa)    
Predicted Functional Partners:
SIN31344.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.606
SIN23886.1
Subtilase family protein.
       0.543
SIN23903.1
Hypothetical protein.
       0.543
SIM58473.1
Predicted dehydrogenase.
  
     0.517
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.517
SIM50415.1
Glycosyl hydrolases family 39.
  
     0.511
SIN26615.1
PH domain-containing protein.
  
     0.505
SIN34681.1
Hypothetical protein.
  
     0.491
SIN39540.1
Hypothetical protein.
  
     0.442
SIM57947.1
Excalibur calcium-binding domain-containing protein.
  
     0.411
Your Current Organism:
Micromonospora cremea
NCBI taxonomy Id: 709881
Other names: CECT 7891, DSM 45599, M. cremea, Micromonospora cremea Carro et al. 2012, Micromonospora sp. CR30, Micromonospora sp. CR36, strain CR30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.