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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL91301.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
KPL91287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KPL91312.1
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
KPL83361.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.852
KPL83688.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.825
KPL92036.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.817
KPL85584.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.817
KPL86620.1
Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.745
KPL85330.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.733
KPL79461.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.733
KPL85484.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
   
 
 0.669
Your Current Organism:
Herpetosiphon geysericola
NCBI taxonomy Id: 70996
Other names: ATCC 23076, CCUG 48727, DSM 7119, H. geysericola, Herpetosiphon geysericolus
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