STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL86226.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)    
Predicted Functional Partners:
KPL90283.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.814
KPL80000.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.669
KPL90337.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
  0.556
KPL90187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.526
KPL91503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.467
KPL80626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.456
KPL90321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.451
KPL86018.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.450
KPL86057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.446
KPL90471.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
    
  0.412
Your Current Organism:
Herpetosiphon geysericola
NCBI taxonomy Id: 70996
Other names: ATCC 23076, CCUG 48727, DSM 7119, H. geysericola, Herpetosiphon geysericolus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.