Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPL82278.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (898 aa)    
Predicted Functional Partners:
KPL82257.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.958
KPL82258.1
AIPR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.952
KPL82256.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.939
KPL86812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
KPL81483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.889
KPL86022.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.883
KPL82255.1
Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
  
 0.862
KPL88125.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.856
KPL89037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
KPL79533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
Your Current Organism:
Herpetosiphon geysericola
NCBI taxonomy Id: 70996
Other names: ATCC 23076, CCUG 48727, DSM 7119, H. geysericola, Herpetosiphon geysericolus
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