STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL82259.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (838 aa)    
Predicted Functional Partners:
KPL82260.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.990
KPL85341.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.525
KPL83701.1
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.521
KPL80349.1
Copper-sensing transcriptional repressor CsoR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.507
KPL79811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.480
KPL85751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.479
KPL90977.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.468
KPL91075.1
Hypothetical protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.452
KPL88980.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.450
KPL81597.1
Ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.429
Your Current Organism:
Herpetosiphon geysericola
NCBI taxonomy Id: 70996
Other names: ATCC 23076, CCUG 48727, DSM 7119, H. geysericola, Herpetosiphon geysericolus
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