Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ADV66144.1Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: bao:BAMF_0884 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family. (297 aa)    
Predicted Functional Partners:
ADV67033.1
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR018541: IPR003593; KEGG: ddr:Deide_15050 putative cell division protein FtsK; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core; SPTR: Putative Cell division protein FtsK; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.
 
   
 0.689
ADV66514.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: rxy:Rxyl_2219 phage integrase; PFAM: Integrase, catalytic core, phage; SPTR: Phage integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.537
ADV68925.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: ddr:Deide_23380 putative chromosome partitioning protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Putative chromosome partitioning protein; TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
  
  
 0.514
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
   
 0.501
ADV67351.1
COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: dra:DR_1389 competence protein ComF, putative; PFAM: Phosphoribosyltransferase; SPTR: Competence protein ComF, putative; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
   
    0.488
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
 
   0.473
mfd
Transcription factor CarD; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
   
 0.441
ADV67608.1
COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099: IPR002912; KEGG: ddr:Deide_10960 putative prephenate dehydrogenase (chorismate mutase--prephenate dehydrogenase); PFAM: Prephenate dehydrogenase; Amino acid-binding ACT; PRIAM: Prephenate dehydrogenase; SPTR: Putative prephenate dehydrogenase (Chorismate mutase--prephenate dehydrogenase); PFAM: Prephenate dehydrogenase.
  
    0.434
ADV68926.1
Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: ddr:Deide_23390 putative chromosome partitioning protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Putative chromosome partitioning protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
   
 0.431
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.413
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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