STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV67628.1Lysine-2,3-aminomutase; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197: IPR003739: IPR022459; KEGG: dge:Dgeo_0988 hypothetical protein; PFAM: Radical SAM; PRIAM: Lysine 2,3-aminomutase; SPTR: Lysine 2,3-aminomutase; TIGRFAM: Lysine-2,3-aminomutase; Conserved hyprothetical protein CHP00238, KamA; PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase. (473 aa)    
Predicted Functional Partners:
lysK
N-acetyl-ornithine/N-acetyl-lysine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine.
  
 
  0.829
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.807
ADV67863.1
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR022641: IPR022642: IPR000780; KEGG: ddr:Deide_2p01020 putative protein-glutamate O-methyltransferase (methyl-accepting chemotaxis protein O-methyltransferase); PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type; SPTR: Putative uncharacterized protein cheR; PFAM: CheR methyltransferase, SAM binding domain; CheR [...]
    
   0.689
ADV67627.1
COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR005814; KEGG: ddr:Deide_09040 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Putative 4-aminobutyrate aminotransferase, aminotransferase class-III; PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.674
ADV67629.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887: IPR019888; KEGG: dge:Dgeo_0987 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: MarR family; AsnC family.
       0.662
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.