Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADV67659.1KEGG: fsu:Fisuc_2212 hypothetical protein; SPTR: Putative uncharacterized protein. (123 aa)    
Predicted Functional Partners:
ADV67658.1
Lipase class 3; InterPro IPR002921; KEGG: mar:MAE_01000 hypothetical protein; PFAM: Lipase, class 3; SPTR: Lipase family; PFAM: Lipase (class 3).
       0.531
ADV67660.1
KEGG: fba:FIC_01925 protein of unknown function DUF892; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF892).
       0.420
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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