STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV67894.1KEGG: ddr:Deide_16690 hypothetical protein; SPTR: Putative uncharacterized protein. (183 aa)    
Predicted Functional Partners:
ADV67895.1
Hypothetical protein; KEGG: yli:YALI0B18194g YALI0B18194p; SPTR: YALI0B18194p.
       0.773
ADV67893.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: ddr:Deide_16680 putative ankyrin; PFAM: Ankyrin repeat; SPTR: Putative ankyrin; PFAM: Ankyrin repeat.
       0.711
ADV67892.1
Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: bid:Bind_0952 HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, HxlR family; PFAM: HxlR-like helix-turn-helix.
       0.514
ADV67098.1
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155: IPR020616: IPR020617; KEGG: ddr:Deide_16670 putative acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase); PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Putative acetyl-CoA C-acetyltransferase (Acetoacetyl-CoA thiolase); TIGRFAM: Thiolase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
       0.453
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.