STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recODNA repair protein recO; Involved in DNA repair and RecF pathway recombination. (244 aa)    
Predicted Functional Partners:
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
 
 0.957
ADV67985.1
PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR018111: IPR003714; KEGG: dge:Dgeo_1272 PhoH-like protein protein; PFAM: PhoH-like protein; K Homology, type 1, subgroup; SPTR: PhoH-like protein, ATPase; PFAM: PhoH-like protein.
  
    0.786
ADV68101.1
KEGG: ddr:Deide_13820 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.727
era
GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.656
ADV68474.1
Competence/damage-inducible protein CinA; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453: IPR008136: IPR008135; KEGG: dge:Dgeo_2136 competence-damaged protein; PFAM: Molybdopterin binding; CinA, C-terminal; SMART: Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor s [...]
     
 0.614
ADV66401.1
Double-stranded RNA binding domain protein; InterPro IPR001159; KEGG: ddr:Deide_03100 hypothetical protein; PFAM: Double-stranded RNA-binding; SMART: Double-stranded RNA-binding; SPTR: Putative uncharacterized protein; PFAM: Double-stranded RNA binding motif.
 
  
 0.573
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.569
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
    0.557
ADV66183.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
 
 0.549
ADV67641.1
Protein of unknown function DUF490; COGs: COG2911 conserved hypothetical protein; InterPro IPR008619: IPR007452; KEGG: dge:Dgeo_0508 hypothetical protein; PFAM: Protein of unknown function DUF490; Filamentous haemagglutinin, bacterial; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
 
     0.542
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.