Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADV68135.1Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: ddr:Deide_3p00280 putative transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Putative transcriptional regulator, MarR family; PFAM: MarR family. (165 aa)    
Predicted Functional Partners:
ADV68136.1
Protein of unknown function DUF606; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: dra:DR_1113 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF606.
       0.826
ADV68137.1
Protein of unknown function DUF606; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: dra:DR_1112 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF606.
       0.746
rpmE
50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
       0.581
ADV65982.1
Regulatory protein MarR; InterPro IPR000835; KEGG: ddr:Deide_17390 putative transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Putative transcriptional regulator, MarR family; PFAM: MarR family.
  
     0.542
ADV67201.1
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: dge:Dgeo_0942 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.
  
     0.511
ADV68138.1
Response regulator receiver protein; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: ddr:Deide_3p02360 putative response regulator, CheY; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative response regulator, CheY; PFAM: Response regulator receiver domain.
       0.490
ADV66565.1
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cts:Ctha_2502 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.
  
     0.467
tdk
COGs: COG1435 Thymidine kinase; HAMAP: Thymidine kinase, subgroup; InterPro IPR020634: IPR001267; KEGG: dge:Dgeo_0578 thymidine kinase; PFAM: Thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; PFAM: Thymidine kinase.
       0.411
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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