STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV68440.14-alpha-glucanotransferase; COGs: COG3408 Glycogen debranching protein; InterPro IPR010401; KEGG: ddr:Deide_06370 putative glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; PRIAM: 4-alpha-glucanotransferase; SPTR: Putative glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative. (650 aa)    
Predicted Functional Partners:
ADV67855.1
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811: IPR011834; KEGG: dge:Dgeo_1198 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: Alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
 
 
 0.930
ADV68441.1
NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: dge:Dgeo_1510 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
       0.716
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.712
ADV67044.1
Phosphoglucomutase, alpha-D-glucose phosphate-specific; COGs: COG0033 Phosphoglucomutase; InterProIPR005852: IPR005844: IPR005845: IPR005846: IPR 005843; KEGG: dge:Dgeo_1875 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; PRIAM: Phosphoglucomutase; SPTR: Phosphoglucomutase, alpha-D-glucose phosphate-specific; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Phosphoglucomutase/phosphomannomutase, [...]
   
  
 0.643
ADV67453.1
Malto-oligosyltrehalose trehalohydrolase; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR012768: IPR004193: IPR006047: IPR006589; KEGG: dge:Dgeo_0540 malto-oligosyltrehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; PRIAM: 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Malto-oligosyltrehalose trehalohydrolase; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; PFAM: Alpha amylase, catalytic domain; Domain of unk [...]
 
  
 0.618
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.566
ADV68370.1
Alpha-1,6-glucosidase, pullulanase-type; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterProIPR005323: IPR004193: IPR006047: IPR011839: IPR 006589; KEGG: ddr:Deide_15110 putative pullulanase precursor (alpha-dextrin endo-1,6-alpha-glucosidase)(pullulan 6-glucanohydrolase); PFAM: Bacterial pullanase-associated protein; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase)(Pul [...]
    
 0.456
ADV68018.1
COGs: COG3429 Glucose-6-P dehydrogenase subunit; InterPro IPR019297; KEGG: ddr:Deide_16470 putative glucose-6-P dehydrogenase subunit; PFAM: Glucose-6-phosphate dehydrogenase subunit; SPTR: Putative glucose-6-P dehydrogenase subunit; PFAM: Glucose-6-phosphate dehydrogenase subunit.
  
     0.442
ADV67547.1
InterPro IPR004830; KEGG: dge:Dgeo_0869 leucine-rich repeat-containing protein; SPTR: Leucine rich repeat variant; PFAM: Leucine rich repeat variant.
  
     0.419
ADV68600.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bbt:BBta_1022 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
 
 
 0.416
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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