STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY32000.1COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: amu:Amuc_1010 response regulator receiver protein; PFAM: LytTr, DNA-binding domain; SPTR: Response regulator; PFAM: LytTr DNA-binding domain. (170 aa)    
Predicted Functional Partners:
ADY32001.1
Hypothetical protein; KEGG: ppr:PBPRA0358 transposase; SPTR: Transposase.
     
 0.758
ADY31430.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: pdi:BDI_3356 two-component system sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase.
 
 
 0.653
ADY33424.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: bth:BT_0222 two-component system sensor; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative two-component system sensor kinase; PFAM: Histidine kinase.
 
 
 0.561
ADY31567.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR004010: IPR010559; KEGG: zpr:ZPR_4664 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Cache; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase.
 
 
 0.554
ADY31999.1
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR003439; KEGG: pdi:BDI_1889 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.
       0.520
ADY32002.1
Hypothetical protein.
       0.457
ADY32003.1
KEGG: dal:Dalk_0004 peptidase C25 gingipain; SPTR: Peptidase C25 gingipain; PFAM: Propeptide_C25; Peptidase family C25.
       0.457
ADY32179.1
InterPro IPR005017; KEGG: bvu:BVU_2305 hypothetical protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Putative uncharacterized protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.436
ADY31453.1
Hypothetical protein; KEGG: cpi:Cpin_5954 aromatic hydrocarbon degradation membrane protein; SPTR: Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.434
Your Current Organism:
Odoribacter splanchnicus
NCBI taxonomy Id: 709991
Other names: O. splanchnicus DSM 20712, Odoribacter splanchnicus DSM 20712, Odoribacter splanchnicus str. DSM 20712, Odoribacter splanchnicus strain DSM 20712
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