STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIV91140.1WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat. (1339 aa)    
Predicted Functional Partners:
EIV91766.1
PFAM: Tetratricopeptide repeat.
  
 
  0.792
EIV94490.1
TPR repeat-containing protein.
  
 
  0.786
EIV91784.1
TPR repeat-containing protein.
  
 
  0.780
EIV91884.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
 
     0.778
EIV91472.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; manually curated.
 
     0.774
EIV92823.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
     0.774
EIV94388.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
     0.774
EIV91904.1
Hypothetical protein.
  
 
  0.773
EIV94529.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
     0.772
EIV94524.1
NB-ARC domain-containing protein; PFAM: NB-ARC domain.
  
 
  0.764
Your Current Organism:
Frankia sp. QA3
NCBI taxonomy Id: 710111
Other names: F. sp. QA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.