STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5V51_8355Enkurin domain-containing protein. (329 aa)    
Predicted Functional Partners:
B5V51_10482
XRCC1_N domain-containing protein.
   
 0.987
B5V51_7391
FHA_2 domain-containing protein.
    
 0.938
B5V51_932
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
   
 0.923
B5V51_2892
Uncharacterized protein; Belongs to the ATP-dependent DNA ligase family.
  
 0.905
B5V51_8413
DNA ligase.
  
 0.893
B5V51_7081
TNFR-Cys domain-containing protein.
  
 0.893
B5V51_2524
Ku domain-containing protein.
    
 0.886
B5V51_9475
DNA ligase.
  
 0.881
Fen1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.864
B5V51_14120
Uncharacterized protein.
   
 0.864
Your Current Organism:
Heliothis virescens
NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm
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