B5V51_6917 protein (Heliothis virescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B5V51_6917

Brix domain-containing protein. (528 aa)

Predicted Functional Partners:

B5V51_4229

0.995

B5V51_5467

0.995

B5V51_510

0.994

B5V51_5374

0.994

B5V51_6431

0.994

B5V51_3174

0.993

B5V51_14659

0.992

B5V51_6300

0.992

B5V51_4696

0.991

B5V51_1962

0.991

Your Current Organism:

Heliothis virescens

NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5V51_14659	B5V51_1962	A0A2A4JQ96	A0A2A4JIX2	Uncharacterized protein.	Uncharacterized protein.	0.995
B5V51_14659	B5V51_3174	A0A2A4JQ96	A0A2A4JES4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.834
B5V51_14659	B5V51_4229	A0A2A4JQ96	A0A2A4JB45	Uncharacterized protein.	Uncharacterized protein.	0.993
B5V51_14659	B5V51_4696	A0A2A4JQ96	A0A2A4JBY2	Uncharacterized protein.	Uncharacterized protein.	0.947
B5V51_14659	B5V51_510	A0A2A4JQ96	A0A2A4JMU0	Uncharacterized protein.	Uncharacterized protein.	0.996
B5V51_14659	B5V51_5374	A0A2A4JQ96	A0A2A4K1D5	Uncharacterized protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.996
B5V51_14659	B5V51_5467	A0A2A4JQ96	A0A2A4K2P0	Uncharacterized protein.	SURF6 domain-containing protein.	0.994
B5V51_14659	B5V51_6300	A0A2A4JQ96	A0A2A4K161	Uncharacterized protein.	Brix domain-containing protein.	0.995
B5V51_14659	B5V51_6431	A0A2A4JQ96	A0A2A4K286	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.990
B5V51_14659	B5V51_6917	A0A2A4JQ96	A0A2A4J5A1	Uncharacterized protein.	Brix domain-containing protein.	0.992
B5V51_1962	B5V51_14659	A0A2A4JIX2	A0A2A4JQ96	Uncharacterized protein.	Uncharacterized protein.	0.995
B5V51_1962	B5V51_3174	A0A2A4JIX2	A0A2A4JES4	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.928
B5V51_1962	B5V51_4229	A0A2A4JIX2	A0A2A4JB45	Uncharacterized protein.	Uncharacterized protein.	0.981
B5V51_1962	B5V51_4696	A0A2A4JIX2	A0A2A4JBY2	Uncharacterized protein.	Uncharacterized protein.	0.940
B5V51_1962	B5V51_510	A0A2A4JIX2	A0A2A4JMU0	Uncharacterized protein.	Uncharacterized protein.	0.991
B5V51_1962	B5V51_5374	A0A2A4JIX2	A0A2A4K1D5	Uncharacterized protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.998
B5V51_1962	B5V51_5467	A0A2A4JIX2	A0A2A4K2P0	Uncharacterized protein.	SURF6 domain-containing protein.	0.980
B5V51_1962	B5V51_6300	A0A2A4JIX2	A0A2A4K161	Uncharacterized protein.	Brix domain-containing protein.	0.998
B5V51_1962	B5V51_6431	A0A2A4JIX2	A0A2A4K286	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.995
B5V51_1962	B5V51_6917	A0A2A4JIX2	A0A2A4J5A1	Uncharacterized protein.	Brix domain-containing protein.	0.991