B5V51_1415 protein (Heliothis virescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B5V51_1415

Uncharacterized protein. (373 aa)

Predicted Functional Partners:

B5V51_2868

0.788

B5V51_10223

0.745

B5V51_4019

0.745

B5V51_8960

0.745

B5V51_2891

0.672

B5V51_9498

0.670

B5V51_10976

0.634

B5V51_1614

0.632

B5V51_11708

0.626

B5V51_13194

0.625

Your Current Organism:

Heliothis virescens

NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5V51_10223	B5V51_10976	A0A2A4IXM1	A0A2A4IYR2	Roc domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.630
B5V51_10223	B5V51_11708	A0A2A4IXM1	A0A2A4IVP2	Roc domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.438
B5V51_10223	B5V51_13194	A0A2A4IXM1	A0A2A4JSS1	Roc domain-containing protein.	Uncharacterized protein.	0.946
B5V51_10223	B5V51_1415	A0A2A4IXM1	A0A2A4JIG3	Roc domain-containing protein.	Uncharacterized protein.	0.745
B5V51_10223	B5V51_1614	A0A2A4IXM1	A0A2A4JJT0	Roc domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999
B5V51_10223	B5V51_2868	A0A2A4IXM1	A0A2A4JEY6	Roc domain-containing protein.	Uncharacterized protein.	0.999
B5V51_10223	B5V51_4019	A0A2A4IXM1	A0A2A4JDL3	Roc domain-containing protein.	Uncharacterized protein.	0.999
B5V51_10223	B5V51_8960	A0A2A4IXM1	A0A2A4KAR1	Roc domain-containing protein.	Protein kinase domain-containing protein.	0.999
B5V51_10223	B5V51_9498	A0A2A4IXM1	A0A2A4J0M8	Roc domain-containing protein.	Uncharacterized protein.	0.637
B5V51_10976	B5V51_10223	A0A2A4IYR2	A0A2A4IXM1	Helicase ATP-binding domain-containing protein.	Roc domain-containing protein.	0.630
B5V51_10976	B5V51_11708	A0A2A4IYR2	A0A2A4IVP2	Helicase ATP-binding domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.991
B5V51_10976	B5V51_13194	A0A2A4IYR2	A0A2A4JSS1	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.518
B5V51_10976	B5V51_1415	A0A2A4IYR2	A0A2A4JIG3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.634
B5V51_10976	B5V51_1614	A0A2A4IYR2	A0A2A4JJT0	Helicase ATP-binding domain-containing protein.	Ubiquitin-like domain-containing protein.	0.752
B5V51_10976	B5V51_4019	A0A2A4IYR2	A0A2A4JDL3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.630
B5V51_10976	B5V51_8960	A0A2A4IYR2	A0A2A4KAR1	Helicase ATP-binding domain-containing protein.	Protein kinase domain-containing protein.	0.630
B5V51_11708	B5V51_10223	A0A2A4IVP2	A0A2A4IXM1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Roc domain-containing protein.	0.438
B5V51_11708	B5V51_10976	A0A2A4IVP2	A0A2A4IYR2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Helicase ATP-binding domain-containing protein.	0.991
B5V51_11708	B5V51_13194	A0A2A4IVP2	A0A2A4JSS1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Uncharacterized protein.	0.958
B5V51_11708	B5V51_1415	A0A2A4IVP2	A0A2A4JIG3	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Uncharacterized protein.	0.626