STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5V51_11263USP domain-containing protein; Belongs to the peptidase C19 family. (750 aa)    
Predicted Functional Partners:
B5V51_476
WD_REPEATS_REGION domain-containing protein.
   
 0.983
B5V51_8658
WD_REPEATS_REGION domain-containing protein.
   
 0.972
B5V51_1614
Ubiquitin-like domain-containing protein.
    
  0.965
B5V51_481
Uncharacterized protein.
    
 0.939
B5V51_13602
Uncharacterized protein.
    
 0.939
B5V51_649
Uncharacterized protein.
    
 0.867
B5V51_11837
Uncharacterized protein.
   
 0.840
RpS20
40S ribosomal protein S20-like protein.
    
  0.811
B5V51_13825
Ubiquitin-like domain-containing protein.
    
  0.811
B5V51_3421
Ubiquitin-like domain-containing protein.
    
  0.811
Your Current Organism:
Heliothis virescens
NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm
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