B5V51_10837 protein (Heliothis virescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B5V51_10837

EGF-like domain-containing protein. (577 aa)

Predicted Functional Partners:

B5V51_12764

0.817

B5V51_9326

0.788

B5V51_8080

0.788

B5V51_2308

0.782

B5V51_8998

0.778

B5V51_3828

0.778

B5V51_14674

0.778

B5V51_12730

0.775

B5V51_3764

0.763

B5V51_872

0.763

Your Current Organism:

Heliothis virescens

NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5V51_10837	B5V51_12730	A0A2A4JV03	A0A2A4JT50	EGF-like domain-containing protein.	Alpha-2-MRAP_C domain-containing protein.	0.775
B5V51_10837	B5V51_12764	A0A2A4JV03	A0A2A4JTN0	EGF-like domain-containing protein.	Uncharacterized protein.	0.817
B5V51_10837	B5V51_14674	A0A2A4JV03	A0A2A4K5Z6	EGF-like domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.778
B5V51_10837	B5V51_2308	A0A2A4JV03	A0A2A4K9A3	EGF-like domain-containing protein.	PID domain-containing protein.	0.782
B5V51_10837	B5V51_3764	A0A2A4JV03	A0A2A4JDH7	EGF-like domain-containing protein.	PID domain-containing protein.	0.763
B5V51_10837	B5V51_3828	A0A2A4JV03	A0A2A4K442	EGF-like domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.778
B5V51_10837	B5V51_8080	A0A2A4JV03	A0A2A4K0B2	EGF-like domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.788
B5V51_10837	B5V51_872	A0A2A4JV03	A0A2A4K643	EGF-like domain-containing protein.	Uncharacterized protein.	0.763
B5V51_10837	B5V51_8998	A0A2A4JV03	A0A2A4JYU1	EGF-like domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.778
B5V51_10837	B5V51_9326	A0A2A4JV03	A0A2A4JYE0	EGF-like domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.788
B5V51_12730	B5V51_10837	A0A2A4JT50	A0A2A4JV03	Alpha-2-MRAP_C domain-containing protein.	EGF-like domain-containing protein.	0.775
B5V51_12764	B5V51_10837	A0A2A4JTN0	A0A2A4JV03	Uncharacterized protein.	EGF-like domain-containing protein.	0.817
B5V51_12764	B5V51_14674	A0A2A4JTN0	A0A2A4K5Z6	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.728
B5V51_12764	B5V51_2308	A0A2A4JTN0	A0A2A4K9A3	Uncharacterized protein.	PID domain-containing protein.	0.610
B5V51_12764	B5V51_3828	A0A2A4JTN0	A0A2A4K442	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.785
B5V51_12764	B5V51_8080	A0A2A4JTN0	A0A2A4K0B2	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.735
B5V51_12764	B5V51_872	A0A2A4JTN0	A0A2A4K643	Uncharacterized protein.	Uncharacterized protein.	0.992
B5V51_12764	B5V51_8998	A0A2A4JTN0	A0A2A4JYU1	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.785
B5V51_12764	B5V51_9326	A0A2A4JTN0	A0A2A4JYE0	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.739
B5V51_14674	B5V51_10837	A0A2A4K5Z6	A0A2A4JV03	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	EGF-like domain-containing protein.	0.778