STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5V51_8055Uncharacterized protein. (2272 aa)    
Predicted Functional Partners:
B5V51_7876
FERM domain-containing protein.
     
 0.865
B5V51_9348
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.856
B5V51_468
Uncharacterized protein.
     
 0.817
B5V51_7134
Uncharacterized protein.
   
 0.793
B5V51_7133
Uncharacterized protein.
   
 0.793
B5V51_13675
WAPL domain-containing protein.
   
    0.780
B5V51_10040
U-box domain-containing protein.
   
 0.778
B5V51_8380
FERM domain-containing protein.
    
 0.778
B5V51_4879
FERM domain-containing protein.
    
 0.778
B5V51_12053
U-box domain-containing protein.
   
 0.778
Your Current Organism:
Heliothis virescens
NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm
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