STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM18876.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
AFM18630.1
Hypothetical protein.
 
    0.793
AFM18599.1
TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
    0.781
AFM15101.1
PFAM: Protein of unknown function (DUF1469).
 
     0.726
AFM18206.1
Putative enzyme involved in inositol metabolism; PFAM: KduI/IolB family.
   
    0.675
AFM15879.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.629
AFM18877.1
Hypothetical protein.
       0.581
AFM18875.1
Hypothetical protein.
       0.547
AFM15716.1
PFAM: PAP2 superfamily.
  
     0.493
AFM15102.1
PFAM: Protein of unknown function (DUF3618).
 
     0.487
AFM18804.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Mycolicibacterium chubuense
NCBI taxonomy Id: 710421
Other names: M. chubuense NBB4, Mycobacterium chubuense NBB4, Mycolicibacterium chubuense NBB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.