STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV73606.1TIGRFAM: mycofactocin precursor. (34 aa)    
Predicted Functional Partners:
AEV73604.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM peptide maturase, mycofactocin system; radical SAM additional 4Fe4S-binding domain.
       0.773
AEV73605.1
TIGRFAM: mycofactocin system RPExFGAL protein; manually curated.
       0.773
AEV73602.1
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase.
       0.757
AEV73603.1
PFAM: FMN-dependent dehydrogenase; TIGRFAM: heme/flavin dehydrogenase, mycofactocin system.
       0.757
Your Current Organism:
Mycolicibacterium rhodesiae NBB3
NCBI taxonomy Id: 710685
Other names: M. rhodesiae NBB3, Mycobacterium rhodesiae NBB3
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