STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV76794.1Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily. (426 aa)    
Predicted Functional Partners:
AEV76795.1
PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.
 
     0.779
AEV76790.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain.
     
 0.552
AEV76793.1
Hypothetical protein.
       0.527
AEV76791.1
Transcriptional regulator; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family.
     
 0.521
AEV76792.1
Sulfotransferase family protein; PFAM: Sulfotransferase domain.
       0.511
AEV76253.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.480
AEV72253.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.465
AEV74569.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
 
  
0.463
AEV76789.1
N-acyl-D-aspartate/D-glutamate deacylase; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family.
       0.416
Your Current Organism:
Mycolicibacterium rhodesiae NBB3
NCBI taxonomy Id: 710685
Other names: M. rhodesiae NBB3, Mycobacterium rhodesiae NBB3
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