STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADU46568.1Peptidase M4 thermolysin; Extracellular zinc metalloprotease. (507 aa)    
Predicted Functional Partners:
ADU46567.1
Protein of unknown function DUF721; COGs: COG5512 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives; InterPro IPR007922; KEGG: kra:Krad_0005 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721).
       0.488
ADU47406.1
UDP-glucuronosyl/UDP-glucosyltransferase; COGs: COG1819 Glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR002213; KEGG: nml:Namu_2594 UDP-glucuronosyl/UDP-glucosyltransferase; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; SPTR: UDP-glucuronosyl/UDP-glucosyltransferase; PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family.
  
    0.449
ADU47643.1
Type III effector Hrp-dependent outer domain protein; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: cdi:DIP2080 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: YgbK domain protein; PFAM: Protein of unknown function, DUF1537.
  
     0.432
ADU47443.1
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
 
    0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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