STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46579.1Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR003593: IPR000408; KEGG: fra:Francci3_4272 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: FtsK/SpoIIIE family. (475 aa)    
Predicted Functional Partners:
ADU46577.1
KEGG: fre:Franean1_5522 replication initiator protein; SPTR: Replication initiator protein.
   
 0.957
ADU46582.1
KEGG: mmi:MMAR_4843 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.896
ADU46575.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: fra:Francci3_4274 phage integrase; PFAM: integrase family protein; SPTR: Integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
     
 0.786
ADU49355.1
KEGG: cms:CMS_2757 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Proteins of 100 residues with WXG; Belongs to the WXG100 family.
  
 
 0.781
ADU46576.1
InterPro IPR010093; KEGG: saq:Sare_1579 DNA binding domain-containing protein; SPTR: DNA binding domain, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
     
 0.777
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.773
ADU46580.1
Hypothetical protein.
       0.773
ADU46581.1
Hypothetical protein; KEGG: bta:508547 phosphodiesterase 4D interacting protein; SPTR: PDE4DIP protein.
       0.773
ADU49459.1
KEGG: sro:Sros_7035 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.584
ADU48035.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
   
 
 0.520
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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