STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46595.1Transposase IS116/IS110/IS902 family protein; InterPro IPR003346; KEGG: mgi:Mflv_1197 transposase, IS111A/IS1328/IS1533; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase, IS111A/IS1328/IS1533; PFAM: Transposase IS116/IS110/IS902 family; Transposase. (400 aa)    
Predicted Functional Partners:
ADU47328.1
InterPro IPR003346; KEGG: mva:Mvan_4882 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase IS116/IS110/IS902 family protein; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.617
ADU49598.1
InterPro IPR003346; KEGG: mva:Mvan_4882 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase IS116/IS110/IS902 family protein; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.601
ADU49597.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: mgi:Mflv_0689 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Putative IS110 family transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.482
ADU49975.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: mgi:Mflv_0689 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Putative IS110 family transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.482
ADU47325.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: mgi:Mflv_0689 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Putative IS110 family transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.474
ADU47405.1
RNA-directed DNA polymerase; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477: IPR013597; KEGG: rha:RHA1_ro10191 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; PRIAM: RNA-directed DNA polymerase; SPTR: RNA-directed DNA polymerase; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
 
     0.413
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.