STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46597.1Integrase catalytic region; InterPro IPR002514: IPR001523: IPR001584; KEGG: nml:Namu_1602 integrase catalytic region; PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; paired box domain protein; SPTR: Integrase catalytic region; manually curated; PFAM: Integrase core domain; Transposase. (613 aa)    
Predicted Functional Partners:
ADU47948.1
Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: gbr:Gbro_4732 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region; PFAM: Integrase core domain.
 
   
 0.568
ADU49980.1
Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: gbr:Gbro_4732 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region; PFAM: Integrase core domain.
 
   
 0.568
ADU46598.1
COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: nth:Nther_0806 McrBC 5-methylcytosine restriction system component-like protein; PFAM: 5-methylcytosine restriction system component-like protein; SPTR: McrBC 5-methylcytosine restriction system component-like protein; PFAM: McrBC 5-methylcytosine restriction system component.
       0.416
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.