STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADU46608.1KEGG: nca:Noca_1866 hypothetical protein; SPTR: Putative uncharacterized protein. (310 aa)    
Predicted Functional Partners:
ADU46609.1
InterPro IPR012312; KEGG: nca:Noca_3980 hemerythrin HHE cation binding domain-containing protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Hemerythrin HHE cation binding domain protein.
       0.541
ADU46694.1
Hypothetical protein; InterPro IPR001607; KEGG: rop:ROP_38800 hypothetical protein; SPTR: Zinc finger domain protein; PFAM: Zn-finger in ubiquitin-hydrolases and other protein.
 
   
 0.514
ADU46607.1
DoxX family protein; COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: kfl:Kfla_3391 DoxX family protein; PFAM: DoxX family protein; SPTR: DoxX family protein; PFAM: DoxX.
  
    0.461
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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