STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46633.1KEGG: bcv:Bcav_3859 hypothetical protein; SPTR: Putative uncharacterized protein. (235 aa)    
Predicted Functional Partners:
ADU46634.1
Alpha/beta hydrolase fold protein; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: chy:CHY_0890 alpha/beta fold family hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: Lysophospholipase L2; PFAM: Putative lysophospholipase.
       0.671
ADU46635.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: sro:Sros_7934 putative LacI-family transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Putative LacI-family transcriptional regulator; manually curated; PFAM: Bacterial regulatory proteins, lacI family; family.
       0.443
ADU48017.1
KEGG: cfl:Cfla_2059 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.415
ADU48189.1
InterPro IPR017517; KEGG: cai:Caci_5617 mycothiol-dependent maleylpyruvate isomerase; SPTR: Putative uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083.
  
     0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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