STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46677.1Hypothetical protein; KEGG: nml:Namu_2334 putative cyclase/dehyrase; SPTR: Putative cyclase/dehyrase. (100 aa)    
Predicted Functional Partners:
ADU46676.1
COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: krh:KRH_11610 ornithine cyclodeaminase/mu-crystallin family protein; PFAM: ornithine cyclodeaminase/mu-crystallin; SPTR: Ornithine cyclodeaminase/mu-crystallin family protein; PFAM: Ornithine cyclodeaminase/mu-crystallin family.
       0.773
ADU46678.1
InterPro IPR005754; KEGG: nml:Namu_4659 peptidase C60 sortase A and B; PFAM: peptidase C60 sortase A and B; SPTR: Peptidase C60 sortase A and B; PFAM: Sortase family.
       0.732
ADU46679.1
Hypothetical protein; KEGG: btk:BT9727_0885 proline-threonine-rich repeat-containing protein; SPTR: Putative uncharacterized protein.
       0.516
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.