STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46714.1Polyketide cyclase/dehydrase; InterPro IPR019587; KEGG: art:Arth_3265 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport. (142 aa)    
Predicted Functional Partners:
ADU46712.1
Protein of unknown function DUF1365; COGs: COG3496 conserved hypothetical protein; InterPro IPR010775; KEGG: rer:RER_23220 hypothetical protein; PFAM: protein of unknown function DUF1365; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1365).
 
     0.807
ADU46713.1
Amine oxidase; COGs: COG2907 NAD/FAD-binding protein; InterPro IPR002937; KEGG: sgr:SGR_5877 putative amine oxidoreductase; PFAM: amine oxidase; SPTR: Amine oxidase; PFAM: Flavin containing amine oxidoreductase.
 
     0.777
ADU46715.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551: IPR006158; KEGG: msv:Mesil_1484 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Probable transcriptional regulator; PFAM: MerR family regulatory protein; B12 binding domain.
 
     0.763
ADU46711.1
COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: sen:SACE_6753 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: Probable cyclopropane-fatty-acyl-phospholipid synthase UfaA1 (Cyclopropane fatty acid synthase) (CFA synthase); PFAM: Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.733
ADU46837.1
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: sco:SCO0635 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold.
  
     0.595
ADU46708.1
Abortive infection protein; InterPro IPR003675; KEGG: kse:Ksed_01050 CAAX amino terminal protease family; PFAM: Abortive infection protein; SPTR: Probable integral membrane protein; PFAM: CAAX amino terminal protease family.
 
     0.583
ADU46707.1
TspO/MBR family protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR004307; KEGG: krh:KRH_21230 hypothetical protein; PFAM: TspO/MBR family protein; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: TspO/MBR family; NmrA-like family.
       0.548
ADU46709.1
COGs: COG0415 Deoxyribodipyrimidine photolyase; InterProIPR006050: IPR005101: IPR001969: IPR018394: IPR 002081; KEGG: kra:Krad_3554 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Phr; PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
       0.541
ADU46710.1
Short-chain dehydrogenase/reductase SDR; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR002347; KEGG: avi:Avi_0085 gluconate 5-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.527
ADU48725.1
NUDIX hydrolase; InterPro IPR000086; KEGG: sro:Sros_4212 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: Putative uncharacterized protein.
 
     0.424
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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