STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46717.1COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547: IPR002645: IPR001902; KEGG: cef:CE1093 putative sulfate transport protein; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative sulfate transport protein; TIGRFAM: sulfate transporter; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1. (593 aa)    
Predicted Functional Partners:
ADU48659.1
COGs: COG2365 Protein tyrosine/serine phosphatase; InterPro IPR016130: IPR000387; KEGG: tcu:Tcur_2401 protein tyrosine/serine phosphatase; SPTR: Protein tyrosine/serine phosphatase-like protein.
   
   0.821
sbcD
Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.818
ADU48496.1
COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797; KEGG: kse:Ksed_16210 cytochrome b subunit of the bc complex; PFAM: Cytochrome b/b6 domain; SPTR: Cytochrome B subunit; PFAM: Cytochrome b(N-terminal)/b6/petB.
    
   0.652
ADU49495.1
Cytochrome b/b6 domain; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797: IPR019794; KEGG: nca:Noca_2944 cytochrome b/b6 domain-containing protein; PFAM: Cytochrome b/b6 domain; SPTR: Cytochrome b/b6, N-terminal domain; PFAM: Cytochrome b(N-terminal)/b6/petB.
    
   0.652
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.598
ADU47242.1
COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR003918: IPR001750: IPR010227; KEGG: cfl:Cfla_2704 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
  
 
 0.467
ADU47262.1
Proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR003918: IPR001750: IPR010227; KEGG: sgr:SGR_2917 putative NADH dehydrogenase chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Putative NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
  
 
 0.467
ADU49270.1
KEGG: kfl:Kfla_6144 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.452
ADU49271.1
KEGG: sma:SAV_5893 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.452
ADU49895.1
Ankyrin; InterPro IPR002110: IPR020683; KEGG: nda:Ndas_2707 ankyrin; PFAM: Ankyrin; SMART: Ankyrin; SPTR: Ankyrin; PFAM: Ankyrin repeat.
    
 
 0.452
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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