Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADU46722.1Rhodanese domain protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: dds:Ddes_2090 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Thiosulfate sulfurtransferase; PFAM: Rhodanese-like domain. (149 aa)    
Predicted Functional Partners:
ADU46721.1
DNA methylase N-4/N-6 domain protein; InterPro IPR002941: IPR017985: IPR001091; KEGG: cur:cur_0372 hypothetical protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Putative uncharacterized protein; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.752
ADU46723.1
InterPro IPR006640; KEGG: nca:Noca_3805 protein of unknown function SprT; SMART: protein of unknown function SprT; SPTR: Putative uncharacterized protein; PFAM: SprT-like family.
       0.477
ADU50054.1
Rhodanese domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: nml:Namu_2578 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
   0.450
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
 
   0.410
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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