STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46729.1KEGG: kse:Ksed_01600 hypothetical protein; SPTR: Putative uncharacterized protein. (295 aa)    
Predicted Functional Partners:
ADU46730.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: kra:Krad_0170 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.821
ADU46728.1
ATP-binding region ATPase domain protein; InterPro IPR003594; KEGG: tcu:Tcur_0095 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: Putative regulatory protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.651
ADU48179.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: kra:Krad_2949 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
  
     0.638
leuS
COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR002302: IPR001412: IPR015413: IPR002300: IPR 013155; KEGG: bcv:Bcav_1730 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; tRNA synthetase class I (M); aminoacyl-tRNA synthetase class Ia; SPTR: Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family.
 
     0.601
ADU46837.1
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: sco:SCO0635 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold.
 
    0.510
ADU49707.1
KEGG: kse:Ksed_06070 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3073).
  
     0.490
ADU48140.1
KEGG: cfl:Cfla_1864 protein of unknown function DUF2581; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2581).
  
     0.487
ADU48804.1
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: sma:SAV_6403 hypothetical protein; PFAM: amidohydrolase; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family.
  
     0.472
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.466
ADU48546.1
KEGG: kse:Ksed_12170 hypothetical protein; SPTR: Methionine aminopeptidase.
  
     0.459
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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