Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU46761.1KEGG: kse:Ksed_01720 hypothetical protein; SPTR: Putative uncharacterized protein. (211 aa)    
Predicted Functional Partners:
ADU48651.1
Lipoprotein LpqB, GerMN domain; InterPro IPR019606: IPR018911; KEGG: kra:Krad_3401 hypothetical protein; PFAM: Lipoprotein LpqB, GerMN domain; Spore germination protein-like Gmad2, bacteria; SPTR: Putative uncharacterized protein; PFAM: Sporulation and spore germination; Immunoglobulin-like domain of bacterial spore germination.
  
     0.694
ADU46760.1
tRNA/rRNA methyltransferase (SpoU); COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537; KEGG: kse:Ksed_01710 rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: Putative rRNA methylase; PFAM: SpoU rRNA Methylase family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.663
ADU47161.1
Methyltransferase type 11; InterPro IPR013216; KEGG: tcu:Tcur_4465 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
 
      0.618
ADU48455.1
KEGG: kse:Ksed_15870 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.594
ADU48015.1
KEGG: kse:Ksed_16720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
ADU50091.1
COGs: COG5650 integral membrane protein; KEGG: kra:Krad_4340 integral membrane protein; SPTR: Putative transmembrane protein; PFAM: Protein of unknown function (DUF2029).
  
     0.495
ADU48768.1
KEGG: kse:Ksed_11250 predicted Rossmann fold nucleotide-binding protein; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase.
  
     0.448
ADU46759.1
Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: sna:Snas_0489 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family.
       0.443
ADU46689.1
COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR007887: IPR001460: IPR002137; KEGG: nca:Noca_4600 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; SPTR: Penicillin-binding protein, transpeptidase; PFAM: Penicillin binding protein transpeptidase domain; NTF2-like N-terminal transpeptidase domain; Penicillin-binding Protein dimerisation domain.
  
     0.433
ADU49109.1
KEGG: art:Arth_2807 hypothetical protein; SPTR: Conserved protein, putative lipoprotein.
  
     0.433
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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