STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46786.1COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: gbr:Gbro_4825 RDD domain containing protein; PFAM: RDD domain containing protein; SPTR: Possible conserved membrane protein; PFAM: RDD family. (256 aa)    
Predicted Functional Partners:
ADU46787.1
Protein of unknown function DUF95 transmembrane; COGs: COG1300 membrane protein; InterPro IPR002798; KEGG: nca:Noca_3912 integral membrane protein; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Putative membrane protein; manually curated; PFAM: Integral membrane protein DUF95.
 
    0.939
ADU46788.1
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: nca:Noca_3911 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
 
    0.793
ADU46790.1
KEGG: nca:Noca_3909 secreted protein; SPTR: Secreted protein.
 
    0.783
ADU46791.1
KEGG: amd:AMED_1140 hypothetical protein; SPTR: Putative integral membrane protein.
 
    0.783
ADU46792.1
KEGG: mul:MUL_4272 hypothetical protein; SPTR: Putative integral membrane protein; PFAM: Membrane domain of glycerophosphoryl diester phosphodiesterase.
 
     0.783
ADU46789.1
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366: IPR003593; KEGG: gbr:Gbro_4821 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: Putative regulatory protein; PFAM: ATPase family associated with various cellular activities (AAA).
 
    0.457
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.