Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADU46824.1KEGG: sgr:SGR_4358 hypothetical protein; SPTR: Putative uncharacterized protein. (462 aa)    
Predicted Functional Partners:
ADU47007.1
KEGG: mva:Mvan_4746 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.624
ADU47163.1
KEGG: rer:RER_17720 hypothetical protein; SPTR: Hypothetical membrane protein; PFAM: SPW repeat.
  
     0.570
ADU48005.1
COGs: COG2251 nuclease (RecB family); InterPro IPR019993; KEGG: gob:Gobs_3698 RecB family nuclease, putative; SPTR: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
    0.545
ADU46823.1
KEGG: kfl:Kfla_2351 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.535
ADU46587.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: fre:Franean1_0907 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: DNA-binding protein; PFAM: Helix-turn-helix.
  
     0.504
ADU46586.1
Protein of unknown function DUF397; InterPro IPR007278; KEGG: tbi:Tbis_0235 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF397).
  
     0.469
ADU46591.1
KEGG: saq:Sare_4736 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.449
ADU49386.1
InterPro IPR004360; KEGG: rha:RHA1_ro03837 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein.
  
     0.406
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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